DATA ACCESS:
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Rhesus Macaque (Macaca mulatta) Contig Mappings onto Human via Pash
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| (Version: Rhesus Mmul_0.1 Assembly - Human NCBI Build 34) |
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Rhesus contigs from the Mmul_0.1 Assembly were mapped onto the human genome using Pash, a sequence comparison tool developed within our lab.
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Mmul_0.1 Assembly Statistics
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4.6x WGS read coverage
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2.69 gbp of assembled contig sequence
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10.5 kbp contig N50
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Pash Mapping Statistics
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97% of contigs were mapped
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2.57 kbp (95%) of the total contig length was mapped
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Mmul_0.1 is a preliminary assembly of rhesus, arising from the Rhesus Genome Project at the Human Genome Sequencing Center.
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- BLAST Against Rhesus Contigs
- Download Rhesus Contig Sequence and Quality
- Download Rhesus Scaffold Sequence and Quality
- Download Rhesus Contig Mapping Cooridinates
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Search for Rhesus Contigs covering a Human gene,
or other area of interest:
- Enter the RefSeq Gene Symbol or gene name.
- You will see the Rhesus Contigs covering your gene, if any, as a Genboree visualization.
- You can also try searching using other "Keywords" (eg, accession numbers, cytobands, etc)
- You can also search for Rhesus Contigs directly by entering their contig number (exa: Contig1000) here.
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Browse Rhesus Contig Mappings by Human Chromosome:
- Select the human chromosome you want to browse in Genboree
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Download Rhesus Contig Mappings onto Specific Human Chromosomes:
- Select the human chromosome for which to download rhesus contig mappings.
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